Spring 2025 EEOB/BCB 546 Schedule
We will update this page before every class with the slides and links to in-class materials. To view the planned schedule of course activities, view the class calendar using the button below.
Accessing Data and Class Files
All of the files used for in-class activities and assignments are published online in a public GitHub repository. It is expected that you will pull any new changes to this repository at the beginning of class. This will enable you to access new data files and scripts needed for in-class activities.
The Spring 2025 repository can be found at: https://github.com/EEOB-BioData/BCB546_Spring2025.
You will also need to access the files associated with the course textbook Bioinformatics Data Skills by Vince Buffalo. This repository can be found here: https://github.com/vsbuffalo/bds-files.
In Class Activities
- In person sessions: 1:10 PM to 2:30 PM in 0030 Bessey Hall.
Current Week
February 19-21
- Feb 19: VB, Chapters 10-11: Sequencing & Alignment Data [slides]; VB, Chapter 4, 5: Intro to Version Control using Git [slides]
- Feb 21: Intro to R [website]
Previous Weeks
January 22-24
- Jan 22: Introduction to the Course [slides] [UNIX_exercise]
- Jan 24: VB, Chapter 3: Getting started with Unix [slides]
January 29-31
- Jan 29: VB, Chapter 3: Getting started with Unix [slides]
- Jan 31: VB, Chapter 7: Advanced Unix [slides]
February 5-7
February 12-14
- Feb 12: Chapter 7: Advanced Unix [slides]; High Performance Computing at ISU [slides]
- Feb 14: VB, Chapters 10-11: Sequencing & Alignment Data [slides]
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